Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835119.1_cds_XP_016505818.1_19113
CDS Infomation

[gene=LOC107823648] [db_xref=GeneID:107823648] [protein=probable aminotransferase ACS12] [protein_id=XP_016505818.1] [location=join(11636..12109,12225..12359,14257..14417,14556..15399)] [gbkey=CDS]
Sequence

ATGACTCGGAGCGGTAACTCAAAACCTAATTCAGACAACGAAACCGACACCGCAAAAACA
TCGCCGCCAAGAGGCAGGGACGGTACTTCAGGCATGAGACTTGTTGTACCCTTACAAGGT
GTAGTTCAAGGCAGAGGCGGACTTATTTTAGGTTCACTCATTCCTTGTGCTCTTTTCTAC
TTCCTCCAGTTCTACTTAAAACGGCACCGTACTAAGCCGTCTTCTTCTTCTTCTAATCCT
CCGTCACCGTCCACGTCATCTCCGAACCTCGCCGAGTTACCACGGTCGTCTTCCCGTTTG
AATCTGTCAACTCGTGATTCAATTGGTCGCGTCTTTTTATCGTCAAGGGCTAGTTTGGTT
GCTGCACCGAATGATTCTCCGTATTACATTGGAATGGATAGGTTCCGAGCGGATCCATAC
AATGAATTGGATAATCCAGACGGCATTATTGATCTGGGACTAGCAGAAAATAGGTTGTCG
CTGGATTTAATAGAGAAGTGGCTTTCAAGCAATTTGAATGATTCGATGCTGGGAAGAGGT
GGTGATGGATTGAATATCAATGGAATTCTTACGTACCAGCCGCTTGATGGATTGACTGGG
CTGAAAGTGGCCATGGCAGGCTTCATGTCTCAGGTCATGGGAGAAAAAGTGTCATTTGAT
CCATCAAGAATGGTGTTAACATCTGGTGCAACTCCAGCCATTGAGCTTCTGTGCTTTTGT
TTGGCTGACCATGGGAATGCTTTGCTTGTTCCCACACCCTATTATCCTGGGTTTGATAGG
GACATAAAATGGAGAACTGGTATAGATCTTATACCTGTTCACTGTCGTAGCTCTGATACC
TTCCTAGTGAACATCACTGCTCTTGATCAAGCATTTAGTCAGGCAAGAAAGCGAGGACAA
AAAGTCCGTGGGATACTTATCTCAAACCCGTCTAACCCTGTAGGGAACATACTGAGTAGG
GAAATGCTACATAGTCTCTTAGATTTTGCGAGGGAGAAGAACATCCATGTAATATTAGAT
GAAATATTTGCTGGATCTAATTACGGTAGTGAAGAGTTTGTAAGCATGGCTGAAATTCTT
GATGAAGAGGATCCTGACAGGGACAGGGTTCATATAATATATGGATTGTCCAAAGACCTT
TCTCTTCCAGGGTTTAGGCTCGGTGTTCTGTATTCCTTTAATGAAAATGTTGTGGCTGCA
TCTAAAAAGTTGGCAAGATTTTGTTCCACTTCAGCACCAACACAGAGGCTATTAGTTGCA
ATGCTTTCAGATGCTGGGTTCATCCAGGATTATATGAGAACAAACAGAGAGAGATTGCGA
AAAGTGTTTGACTTATTTGTGGCAGGTCTAAAACAATTTGGCATTGAATGCATGAACAGC
AGTGCAGGTCTGTATTGTTGGGTTAATATGAGCAGATTGATTTGCCCTTATAATGAAAAG
GGAGAGCTAAAGCTGTGGGAGAAGCTCTTGAATGTAGCTAAAATAAACGTGACTCCAGGG
TCAGCTTGTCATTGTATTGAACCTGGATGGTTCAGATGTTGTTTTAGTACGTTAGCAGAA
AAGGACATTCCTGTAGTTATGGAACGGATACGTAAAGTTGTTGAACGTAAGTAG

Peptide Sequence

PEP ID

XP_016505818.1
PEP Infomation

PREDICTED: probable aminotransferase ACS12 [Nicotiana tabacum]
Sequence

MTRSGNSKPNSDNETDTAKTSPPRGRDGTSGMRLVVPLQGVVQGRGGLILGSLIPCALFY
FLQFYLKRHRTKPSSSSSNPPSPSTSSPNLAELPRSSSRLNLSTRDSIGRVFLSSRASLV
AAPNDSPYYIGMDRFRADPYNELDNPDGIIDLGLAENRLSLDLIEKWLSSNLNDSMLGRG
GDGLNINGILTYQPLDGLTGLKVAMAGFMSQVMGEKVSFDPSRMVLTSGATPAIELLCFC
LADHGNALLVPTPYYPGFDRDIKWRTGIDLIPVHCRSSDTFLVNITALDQAFSQARKRGQ
KVRGILISNPSNPVGNILSREMLHSLLDFAREKNIHVILDEIFAGSNYGSEEFVSMAEIL
DEEDPDRDRVHIIYGLSKDLSLPGFRLGVLYSFNENVVAASKKLARFCSTSAPTQRLLVA
MLSDAGFIQDYMRTNRERLRKVFDLFVAGLKQFGIECMNSSAGLYCWVNMSRLICPYNEK
GELKLWEKLLNVAKINVTPGSACHCIEPGWFRCCFSTLAEKDIPVVMERIRKVVERK

Transcript Sequence

Gene sequence data has not been registered.